mdvtools.dbutils.dbmodels
=========================

.. py:module:: mdvtools.dbutils.dbmodels


Attributes
----------

.. autoapisummary::

   mdvtools.dbutils.dbmodels.db


Classes
-------

.. autoapisummary::

   mdvtools.dbutils.dbmodels.User
   mdvtools.dbutils.dbmodels.Project
   mdvtools.dbutils.dbmodels.File
   mdvtools.dbutils.dbmodels.UserProject
   mdvtools.dbutils.dbmodels.Genome
   mdvtools.dbutils.dbmodels.Job
   mdvtools.dbutils.dbmodels.Permission
   mdvtools.dbutils.dbmodels.SharedObject
   mdvtools.dbutils.dbmodels.UserPreference
   mdvtools.dbutils.dbmodels.ViewSet
   mdvtools.dbutils.dbmodels.GeneSet


Module Contents
---------------

.. py:data:: db

.. py:class:: User

   Bases: :py:obj:`db`


   .. py:attribute:: __tablename__
      :value: 'users'



   .. py:attribute:: id


   .. py:attribute:: email


   .. py:attribute:: confirmed_at


   .. py:attribute:: password


   .. py:attribute:: is_active


   .. py:attribute:: first_name


   .. py:attribute:: last_name


   .. py:attribute:: administrator


   .. py:attribute:: institution


   .. py:attribute:: projects


   .. py:attribute:: jobs


   .. py:attribute:: permissions


   .. py:attribute:: preferences


.. py:class:: Project

   Bases: :py:obj:`db`


   .. py:attribute:: __tablename__
      :value: 'projects'



   .. py:attribute:: id


   .. py:attribute:: name


   .. py:attribute:: path


   .. py:attribute:: created_timestamp


   .. py:attribute:: is_deleted


   .. py:attribute:: deleted_timestamp


   .. py:attribute:: update_timestamp


   .. py:attribute:: accessed_timestamp


   .. py:attribute:: owner


   .. py:attribute:: type


   .. py:attribute:: data


   .. py:attribute:: is_public


   .. py:attribute:: date_made_public


   .. py:attribute:: status


   .. py:attribute:: genome


   .. py:attribute:: parent


   .. py:attribute:: description


   .. py:attribute:: access_level


   .. py:attribute:: users


   .. py:attribute:: files


   .. py:attribute:: __table_args__


.. py:class:: File

   Bases: :py:obj:`db`


   .. py:attribute:: __tablename__
      :value: 'files'



   .. py:attribute:: id


   .. py:attribute:: name


   .. py:attribute:: file_path


   .. py:attribute:: upload_timestamp


   .. py:attribute:: update_timestamp


   .. py:attribute:: project_id


.. py:class:: UserProject

   Bases: :py:obj:`db`


   .. py:attribute:: __tablename__
      :value: 'user_projects'



   .. py:attribute:: id


   .. py:attribute:: user_id


   .. py:attribute:: project_id


   .. py:attribute:: can_read


   .. py:attribute:: can_write


.. py:class:: Genome

   Bases: :py:obj:`db`


   .. py:attribute:: __tablename__
      :value: 'genomes'



   .. py:attribute:: id


   .. py:attribute:: name


   .. py:attribute:: label


   .. py:attribute:: data


   .. py:attribute:: database


   .. py:attribute:: date_added


   .. py:attribute:: connections


   .. py:attribute:: icon


   .. py:attribute:: is_public


   .. py:attribute:: chrom_sizes


   .. py:attribute:: small_icon


   .. py:attribute:: projects


.. py:class:: Job

   Bases: :py:obj:`db`


   .. py:attribute:: __tablename__
      :value: 'jobs'



   .. py:attribute:: id


   .. py:attribute:: inputs


   .. py:attribute:: user_id


   .. py:attribute:: outputs


   .. py:attribute:: sent_on


   .. py:attribute:: status


   .. py:attribute:: class_name


   .. py:attribute:: genome


   .. py:attribute:: finished_on


   .. py:attribute:: is_deleted


   .. py:attribute:: type


.. py:class:: Permission

   Bases: :py:obj:`db`


   .. py:attribute:: __tablename__
      :value: 'permissions'



   .. py:attribute:: id


   .. py:attribute:: user_id


   .. py:attribute:: permission


   .. py:attribute:: value


.. py:class:: SharedObject

   Bases: :py:obj:`db`


   .. py:attribute:: __tablename__
      :value: 'shared_objects'



   .. py:attribute:: id


   .. py:attribute:: owner


   .. py:attribute:: shared_with


   .. py:attribute:: object_id


   .. py:attribute:: date_shared


   .. py:attribute:: level


.. py:class:: UserPreference

   Bases: :py:obj:`db`


   .. py:attribute:: __tablename__
      :value: 'user_preferences'



   .. py:attribute:: id


   .. py:attribute:: preference


   .. py:attribute:: data


   .. py:attribute:: user_id


.. py:class:: ViewSet

   Bases: :py:obj:`db`


   .. py:attribute:: __tablename__
      :value: 'view_sets'



   .. py:attribute:: id


   .. py:attribute:: table_name


   .. py:attribute:: name


   .. py:attribute:: description


   .. py:attribute:: date_added


   .. py:attribute:: date_modified


   .. py:attribute:: owner


   .. py:attribute:: is_public


   .. py:attribute:: fields


   .. py:attribute:: data


   .. py:attribute:: date_made_public


   .. py:attribute:: status


   .. py:attribute:: is_deleted


.. py:class:: GeneSet

   Bases: :py:obj:`db`


   .. py:attribute:: __tablename__
      :value: 'gene_sets'



   .. py:attribute:: id


   .. py:attribute:: name


   .. py:attribute:: table_name


   .. py:attribute:: data


   .. py:attribute:: date_added


   .. py:attribute:: date_modified


   .. py:attribute:: is_deleted


   .. py:attribute:: description