import os
import json
import pandas as pd
from mdvtools.mdvproject import MDVProject
from mdvtools.charts.heatmap_plot import HeatmapPlot
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def create_heatmap_plot(title, params, size, position, colorscale, x_axis_settings, y_axis_settings):
"""Create and configure a HeatmapPlot instance with the given parameters."""
plot = HeatmapPlot(
title=title,
params=params,
size=size,
position=position
)
plot.set_color_scale(colorscale) # colorscale setting
plot.set_x_axis(**x_axis_settings) # x-axis settings
plot.set_y_axis(**y_axis_settings) # y-axis settings
return plot
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def load_data(path):
"""Load data from the specified CSV file."""
return pd.read_csv(path, low_memory=False)
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def convert_plot_to_json(plot):
"""Convert plot data to JSON format."""
return json.loads(json.dumps(plot.plot_data, indent=2).replace("\\\\", ""))
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def main():
"""Main function to create the project and serve it."""
# Constants
project_path = os.path.expanduser('~/mdv/project')
data_path = "path_to_data"
view_name = "default"
# Create project
project = MDVProject(project_path, delete_existing=True)
# Load data
data_frame = load_data(data_path)
# Set the correct data type to the "leiden" data source (imports as integer but it should be str to appear as a category)
data_frame['leiden'] = data_frame['leiden'].apply(str)
# Add datasource
project.add_datasource(data_path, data_frame)
# HeatmapPlot parameters
title = "Heatmap Plot Example"
params = ["leiden", "ARVCF", "DOK3", "FAM210B", "GBGT1", "NFE2L2", "UBE2D4", "YPEL2"]
size = [792, 472]
position = [10, 10]
colorscale = {
'log': False
}
x_axis_settings = {
'axis_labels': "X-Axis Label",
'axis_title': "X-Axis Title",
}
y_axis_settings = {
'axis_labels': "Y-Axis Label",
'axis_title': "Y-Axis Title",
#'rotate_labels': 45
}
# Create plot
heatmap_plot = create_heatmap_plot(title, params, size, position, colorscale, x_axis_settings, y_axis_settings)
# Convert plot to JSON and set view
heatmap_plot_json = convert_plot_to_json(heatmap_plot)
heatmap_view = {'initialCharts': {data_path: [heatmap_plot_json]}}
project.set_view(view_name, heatmap_view)
project.set_editable(True)
project.serve()
if __name__ == "__main__":
main()