Class BamReader

Class for reading a bam file

Param: config

Param: parent

Index

Constructors

Properties

ac_class baiPath bamPath config filter headPath pairsSupported parent samplingDepth samplingWindowSize

Methods

readAlignments readHeader

Constructors

constructor

new BamReader(config: any, parent: any): BamReader
Parameters
- config: any
- parent: any
Returns BamReader
- Defined in src/browser/bam.js:794

Properties

ac_class

ac_class: any

baiPath

baiPath: any

bamPath

bamPath: any

config

config: any

filter

filter: any

headPath

headPath: any

pairsSupported

pairsSupported: any

parent

parent: any

samplingDepth

samplingDepth: any

samplingWindowSize

samplingWindowSize: any

Methods

readAlignments

readAlignments(chr: any, bpStart: any, bpEnd: any): Promise<any>
Parameters
- chr: any
- bpStart: any
- bpEnd: any
Returns Promise<any>
- Defined in src/browser/bam.js:827

readHeader

readHeader(): Promise<any>
Returns Promise<any>
- Defined in src/browser/bam.js:1134