Class PairedAlignment

constructor

• new PairedAlignment(firstAlignment: any): PairedAlignment

• Parameters

  • firstAlignment: any

  Returns PairedAlignment

chr

connectingEnd

connectingStart

end

firstAlignment

lengthOnRef

readName

secondAlignment

start

firstOfPairStrand

• firstOfPairStrand(): any

• Returns any

isPaired

• isPaired(): boolean

• Returns boolean

popupData

• popupData(genomicLocation: any): any[]

• Parameters

  • genomicLocation: any

  Returns any[]

setSecondAlignment

• setSecondAlignment(alignment: any): void

• Parameters

  • alignment: any

  Returns void