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mdv
mdv
browser/bam
bgzBlockSize
Function bgzBlockSize
bgzBlockSize
(
data
:
any
)
:
number
Parameters
data
:
any
Returns
number
Settings
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mdv
chartmanager
charts
BaseChart
BaseChart
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ChartManager
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chartManager
charts
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RowsAsColumnsLink
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dialogs
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addChartDialogReact
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AnndataConflictDialog
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AnnotationDialogReact
annotationDialogReact
ChooseColumnDialog
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ColorChooser
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ColumnPreview
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CustomDialog
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DatasourceDropdown
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datasourceWorker
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FileUploadDialog
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MatrixData
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Matrix
MatrixEntries
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LinkDataDialog
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SimpleTiffViewer
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utils/h5Processing
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NonAnnDataError
H5Metadata
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DatasetValue
H5DataType
MatrixValue
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processH5File
DotPlot
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GenomeBrowser
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GridInstance
P
positionChart
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RowSummaryBox
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SelectionDialog
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SingleHeatMapGroup
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TextBoxChart
TreeDiagram
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WGLScatterPlot
dataloader
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RowsAsColslink
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useHighlightedForeignRows
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useRowsAsColumnsLinks
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COLOR_PALLETE
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GLOBAL_SLIDER_DIMENSION_FIELDS
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MAX_CHANNELS
hooks
useImage
MDVivViewer
View
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ViewStates
VivPickInfo
VivViewerWrapperState
getVivId
MDVivViewer
state
<internal>
DEFAUlT_CHANNEL_VALUES
DEFAULT_IMAGE_STATE
DEFAULT_VIEWER_STATE
BIO_ZARR
BooleanKeys
ChannelsState
ChannelsStore
ImageSettingsStore
ImageState
Metadata
NewChannelValues
OME_TIFF
OME_ZARR
PixelSource
ROI
SetFunctionType
StoreName
TogglesReturnType
ViewerState
ViewerStore
VivConfig
VivContextType
WithToggles
DEFAUlT_CHANNEL_STATE
applyDefaultChannelState
createVivStores
useChannelsStore
useChannelsStoreApi
useImageSettingsStore
useImageSettingsStoreApi
useLoader
useMetadata
useViewerStore
useViewerStoreApi
VivProvider
utils
RenderingMode
UrlOrFiles
VivSelection
buildDefaultSelection
createLoader
get3DExtension
getBoundingCube
getMultiSelectionStats
getNameFromUrl
getPhysicalSizeScalingMatrix
getSingleSelectionStats
getSingleSelectionStats2D
getSingleSelectionStats3D
guessRgb
hexToRgb
isInterleaved
isMobileOrTablet
range
sizeToMeters
truncateDecimalNumber
useWindowSize
VivController
VivController
zustandTypes
EqFn
ExtractState
ReadonlyStoreApi
Selector
WithReact
ZustandStore
BaseReactChart
BaseReactChart
TComponent
ColorChannelComponents
MainVivColorDialog
Test
ColorChannelDialogReactWrapper
ColorDialogReactWrapper
ColorPicker
MyRgbColor
PopoverPicker
ColumnSelectionComponent
ColumnSelectionProps
ColumnSelectionComponent
DebugJsonDialogComponent
debugJsonDialogComponent
DebugJsonDialogReactWrapper
DebugChartReactWrapper
ErrorComponentReactWrapper
ErrorComponentType
ErrorComponentReactWrapper
FilterComponentReactWrapper
DropdownType
FilterComponentReactWrapper
HighlightedFeatureChart
highlightedFeatureChart
HighlightedFeatureComponent
HighlightedFeatureComponent
LinksComponent
linksComponent
SelectionDialogComponent
SelectionDialogComponent
SelectionDialogReact
CategoryFilter
MultiTextFilter
RangeFilter
SelectionDialogConfig
SelectionDialogFilter
UniqueFilter
SelectionOverlay
selectionOverlay
SettingsDialogComponent
ColumnSelectionSpec
DropdownSpec
AbstractComponent
ColumnSelectionSettingGui
DropdownAutocompleteComponent
MLabel
settingsDialogComponent
SettingsDialogReactWrapper
SettingsDialogReactWrapper
VivMDVReact
<internal>
VivMdvReact
CategoryFilter
ScatterPlotConfig
TooltipConfig
VivMDVReact
VivMdvReactConfig
VivMdvReactType
VivRoiConfig
vivMDVReact
VivScatterComponent
ViewState
VivScatter
WordCloudChart
wordCloudChart
context
ChartContext
DataStoreContext
ChartProvider
useChart
useDataStore
useVivConfig
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useLegacyDualContour
HmrHack
DoImportSideEffects
hooks
useCategoryFilterIndices
useChartDoc
useChartID
useChartSize
useConfig
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useFilteredIndices
useImgUrl
useNamedColumn
useParamColumns
useParamColumnsExperimental
useRangeDimension2D
useRegion
react_utils
createMdvPortal
scatter_state
P
useRegionScale
useScatterplotLayer
screen_state
OuterContainerObservable
OuterContainerProvider
useOuterContainer
selectionHooks
useHighlightedIndex
spatial_context
MeasureState
P
RangeState
SpatialAnnotationState
SpatialAnnotationProvider
useMeasure
useRange
useSpatialLayers
spatialdata
views
browser
bam
AlignmentContainer
BamAlignment
BamFeatureReader
BamFilter
BamReader
BamSource
Coverage
CoverageMap
DownsampleBucket
PairedAlignment
bgzBlockSize
loadBamIndex
bam_track
AlignmentTrack
BAMTrack
CoverageTrack
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BamSCATrack
bigwig
BinaryParser
BPTree
BufferedReader
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BWSource
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extra
interaction_track
InteractionTrack
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SCACoverageMap
simple_browser
<internal>
BaseBrowser
BrowserControls
SimpleBrowser
SinglePanelBrowser
SpliceModelTrack
tiled_image_track
TiledImageTrack
ucsc_track
UCSCMLVTrack
feature
BigBedFeatureSource
FastaSequence
FeatureFileReader
FeatureSource
TabixBedFeatureSource
igvxhr
igvxhr
unbgzf
panel
MLVPanel
track_dialog
AddTrackDialog
MLVTrackDialog
tracks
Graphics
MLVBedTrack
MLVBigBedTrack
MLVTrack
MLVWigTrack
RulerTrack
TickSpacing
tribble
loadTribbleIndex
utils
Utils
catalog
catalog
App
catalog_index
CreateProject
ProjectTemplates
Dashboard
Dashboard
hooks
useProjects
useProjects
useUser
User
useUser
ProjectAccessModal
ProjectAccessModalProps
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ProjectCard
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ProjectCard
ProjectDeleteModal
ProjectDeleteModalProps
ProjectDeleteModal
ProjectErrorModal
ErrorModalProps
ErrorModal
ProjectInfoModal
ProjectInfoModalProps
ProjectInfoModal
ProjectListView
MouseEv
ProjectListViewProps
Pvoid
ProjectListView
ProjectRenameModal
ProjectRenameModalProps
ProjectRenameModal
ProjectSettingsModal
ProjectSettingsModalProps
ProjectSettingsModal
ProjectShareModal
ProjectShareModalProps
ProjectShareModal
UserProfile
UserProfile
utils/projectUtils
Project
ProjectAccessType
SortBy
SortOrder
sortProjects
components/ui
accordion
Accordion
AccordionContent
AccordionItem
AccordionTrigger
label
Label
radio-group
RadioGroup
RadioGroupItem
DataLoaders
ChartManager
decompressData
getArrayBufferDataLoader
getLocalCompressedBinaryDataLoader
processArrayBuffer
dataloaders/DataLoaderUtil
buildPath
fetchJsonConfig
getDataLoader
getPostData
getProjectURL
loadColumn
setProjectRoot
datastore
binWorker
func
boxPlotWorker
kernelDensityEstimator
median
multiBoxPlot
stKernelDensityEstimator
CatColDimension
CatColDimension
catColWorker
addAverages
addMedians
addMedianst
addSimpleMean
CategoryDimension
CategoryDimension
CatRangeDimension
CatRangeDimension
catWorker
calculateSets
getDoubleCategory
getNumberInCategory
getProportionData
getSankeyData
getStackedData
std
dataExportUtils
getExportCsvStream
DataStore
DataStore
defaultPalette
hexToRGB
RGBToHex
datatypes
datatypes
DeepToolsDimension
DeepToolsDimension
deepToolsWorker
DensityDimension
DensityDimension
densityWorker
Dimension
Dimension
filteredIndexWorker
RangeDimension
RangeDimension
rawHistogramWorker
HistogramConfig
SortableDimension
SortableDimension
sortWorker
ValueSetDimension
dev/MockDataStore
mockColumns
getRandomData
getRandomDataStore
mockDataLoader
mockDataSource
editable-layers/deck-community-ish
draw-rectangle-by-dragging-mode
DrawRectangleByDraggingMode
translate-mode-exp
TranslateModeEx
mapCoords
legacy/hyperion
scLoadData
scLoadMetaData
lib/utils
Entries
cn
columnMatchesType
g
getEntries
isArray
isDatatypeCategorical
isDatatypeNumeric
toArray
links/link_utils
ChartLink
HighlightColumnLink
LinkTarget
addChartLink
addHighlightColumnLink
login
login
Login
login_index
modules
all_css
basic_index
basic_index_nf
desktop_index
changeURLParam
obvios_index
ProjectContext
ProjectInfo
getProjectInfo
ProjectProvider
useProject
static_index
Datasource
wdyr
table
DataModel
DataModel
ImageTable
ImageTable
RowSelectionModel
RowSelectionModel
Slick
EditorLock
Event
EventData
EventHandler
Group
GroupTotals
NonDataItem
Range
TreeColumns
Map
Slick
SlickGrid
SlickGrid
TextEditor
Overlays
TagModel
TagModel
TagColumn
tests/guispectests
ThemeProvider
ColorMode
CustomThemeProvider
useColorMode
utilities
AutoComplete
AutoComplete
clustering
HierarchicalClustering
getHierarchicalNodes
parseNewick
Color
getColorBar
getColorLegend
getColorLegendCustom
ContextMenu
ContextMenu
Dialog
BaseDialog
getTextInput
Elements
MDVProgress
addElProps
addResizeListener
createFilterElement
createMenuIcon
createSVGEl
getElDim
makeDraggable
makeResizable
makeSortable
removeDraggable
removeResizable
splitPane
createEl
ElementsTyped
Attrs
TagKey
createEl
FileUploadDialog
FileUploadDialog
InterProcessCommunication
connectIPC
MarkdownText
markdownText
MultiSelect
MultiSelectDropdown
PanZoom
ImagePanZoom
Popout
popoutChart
SettingsDialog
SettingsDialog
Utilities
debounce
getRandomString
isColumnNumeric
isColumnText
NPOT
venn
circleintersection
circleArea
circleCircleIntersection
circleOverlap
distance
getCenter
intersectionArea
diagram
circleFromPath
circlePath
computeTextCentre
computeTextCentres
intersectionAreaPath
sortAreas
VennDiagram
wrapText
layout
bestInitialLayout
nelderMead
normalizeSolution
scaleSolution
lossFunction
venn
VivUtils
getBoundingCube
getDefaultChannelColors
getDefaultSelectionStats
getMultiSelectionStats
getPhysicalSizeScalingMatrix
getSingleSelectioStats3D
webgl
Camera
Camera
HeatmapContourExtension
TriangleLayerContours
_TriangleLayerProps
ExtraContourProps
ImageArray
ImageArray
ImageArrayConfig
ImageArrayEntry
ImageArrayDeckExtension
ImageArrayDeckExtension
ImageArrayExtensionProps
ScatterDeckExtension
ScatterDensityExension
ScatterSquareExtension
SpatialLayer
SpatialLayer
SpatialLayerProps
VivContrastExtension
VivContrastExtension
ContrastProps
VivViewerMDV
VivViewerMDV
acceptTiffCache
VivVolume
WGL2DI
WGL2DI
M
M
N
E
P
V
F
C
I
C
P
M
F
P
C
P
T
T
A
A
A
T
R