Class MLVTrack

constructor

• new MLVTrack(config: any): MLVTrack

• Parameters

  • config: any

  Returns MLVTrack

color_function

config

Staticcustom_tracks

_setFeatureSource

• _setFeatureSource(): void

• Returns void

addExtraControls

• addExtraControls(div: any, panel: any): void

• Parameters

  • div: any
  • panel: any

  Returns void

drawMessage

• drawMessage(options: any): void

• Parameters

  • options: any

  Returns void

drawScale

• drawScale(ctx: any): void

• Parameters

  • ctx: any

  Returns void

getConfig

• getConfig(): any

• Returns any

getFeatureAt

• getFeatureAt(
      genomicLocation: any,
      chr: any,
      yOffset: any,
      bpPerPixel: any,
  ): null

• Parameters

  • genomicLocation: any
  • chr: any
  • yOffset: any
  • bpPerPixel: any

  Returns null

getFeatures

• getFeatures(
      chr: string,
      bpStart: integer,
      bpEnd: integer,
      force: boolean,
      data: Object,
  ): any

• Retrieves the features requested, the default is just to get the features from the feature source

  Parameters

  • chr: string

    The chromosome
  • bpStart: integer

    The start of the range from which to obtain features
  • bpEnd: integer

    The end of the range from which to obtain features
  • force: boolean

    If true then cached features should not be used but fresh features retrieved
  • data: Object

    contains bp ber pixel and width of the canvas

  Returns any

getSettings

• getSettings(
      panel: any,
  ): (
      | {
          current_value: any;
          func: (x: any) => void;
          label: string;
          max?: undefined;
          min?: undefined;
          type: string;
      }
      | {
          current_value: any;
          func: (x: any) => void;
          label: string;
          max: number;
          min: number;
          type: string;
      }
      | {
          current_value?: undefined;
          func: () => void;
          label: string;
          max?: undefined;
          min?: undefined;
          type: string;
      }
  )[]

• Parameters

  • panel: any

  Returns (
      | {
          current_value: any;
          func: (x: any) => void;
          label: string;
          max?: undefined;
          min?: undefined;
          type: string;
      }
      | {
          current_value: any;
          func: (x: any) => void;
          label: string;
          max: number;
          min: number;
          type: string;
      }
      | {
          current_value?: undefined;
          func: () => void;
          label: string;
          max?: undefined;
          min?: undefined;
          type: string;
      }
  )[]

setColorFunction

• setColorFunction(func: any): void

• Parameters

  • func: any

  Returns void

setConfig

• setConfig(config: any): void

• Parameters

  • config: any

  Returns void

setConfigAttribute

• setConfigAttribute(attribute: any, value: any): void

• Parameters

  • attribute: any
  • value: any

  Returns void

StaticcalculateLabel

• calculateLabel(url: any): any

• Parameters

  • url: any

  Returns any

StaticgetTrack

• getTrack(config: any): any

• Parameters

  • config: any

  Returns any

StaticgetTypeFromURL

• getTypeFromURL(url: any): { format: string; type: string }

• Parameters

  • url: any

  Returns { format: string; type: string }

StaticparseConfig

• parseConfig(con: any): any

• Parameters

  • con: any

  Returns any